Joe installed pretty much the same setup as you are describing, minus the engine change.
I had a weird issue for awhile that when I really romped on it, I would get shaking when I depressed the clutch and it felt like it was "pushing back" at me. After awhile, it went away and is now driving perfectly, even when I romp on it.
Don't know if this helps or not, but there seemed to be a pretty hefty break-in time after the install.
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